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Cobmine an SDTM domain with its corresponding Supplemental data set

Source: R/ru_addsupp.R
ru_addsupp.Rd

Pass in an SDTM data frame along with its Supplemental version and they will be combined.

Usage

ru_addsupp(dsetin, dsetinsupp)

Arguments

dsetin

Incoming data frame to have supplemental data added.

dsetinsupp

The supplemental data set to add.

Value

The original SDTM data set with its supplemental data appended as new variables.

Author

Yongwei Wang, yongwei.x.wang@viivhealthcare.com
Chris Rook, cr883296@gmail.com

Examples

library(repfun)
library(knitr)
ae <- repfun::ae
suppae <- repfun::suppae
aesupp <- repfun::ru_addsupp(dsetin=ae,dsetinsupp=suppae)
knitr::kable(head(aesupp,5), caption = "SDTM.AE combined with SDTM.SUPPAE")
#> 
#> 
#> Table: SDTM.AE combined with SDTM.SUPPAE
#> 
#> |STUDYID      |DOMAIN |USUBJID     | AESEQ|AESPID |AETERM                               |AELLT                    | AELLTCD|AEDECOD                              | AEPTCD|AEHLT    | AEHLTCD|AEHLGT    | AEHLGTCD|AEBODSYS                                             | AEBDSYCD|AESOC                                                | AESOCCD|AESEV |AESER |AEACN |AEREL    |AEOUT                      |AESCAN |AESCONG |AESDISAB |AESDTH |AESHOSP |AESLIFE |AESOD |AEDTC      |AESTDTC    |AEENDTC    | AESTDY| AEENDY|AETRTEM |
#> |:------------|:------|:-----------|-----:|:------|:------------------------------------|:------------------------|-------:|:------------------------------------|------:|:--------|-------:|:---------|--------:|:----------------------------------------------------|--------:|:----------------------------------------------------|-------:|:-----|:-----|:-----|:--------|:--------------------------|:------|:-------|:--------|:------|:-------|:-------|:-----|:----------|:----------|:----------|------:|------:|:-------|
#> |CDISCPILOT01 |AE     |01-701-1015 |     1|E07    |APPLICATION SITE ERYTHEMA            |APPLICATION SITE REDNESS |      NA|APPLICATION SITE ERYTHEMA            |     NA|HLT_0617 |      NA|HLGT_0152 |       NA|GENERAL DISORDERS AND ADMINISTRATION SITE CONDITIONS |       NA|GENERAL DISORDERS AND ADMINISTRATION SITE CONDITIONS |      NA|MILD  |N     |NA    |PROBABLE |NOT RECOVERED/NOT RESOLVED |N      |N       |N        |N      |N       |N       |N     |2014-01-16 |2014-01-03 |NA         |      2|     NA|Y       |
#> |CDISCPILOT01 |AE     |01-701-1015 |     2|E08    |APPLICATION SITE PRURITUS            |APPLICATION SITE ITCHING |      NA|APPLICATION SITE PRURITUS            |     NA|HLT_0317 |      NA|HLGT_0338 |       NA|GENERAL DISORDERS AND ADMINISTRATION SITE CONDITIONS |       NA|GENERAL DISORDERS AND ADMINISTRATION SITE CONDITIONS |      NA|MILD  |N     |NA    |PROBABLE |NOT RECOVERED/NOT RESOLVED |N      |N       |N        |N      |N       |N       |N     |2014-01-16 |2014-01-03 |NA         |      2|     NA|Y       |
#> |CDISCPILOT01 |AE     |01-701-1015 |     3|E06    |DIARRHOEA                            |DIARRHEA                 |      NA|DIARRHOEA                            |     NA|HLT_0148 |      NA|HLGT_0588 |       NA|GASTROINTESTINAL DISORDERS                           |       NA|GASTROINTESTINAL DISORDERS                           |      NA|MILD  |N     |NA    |REMOTE   |RECOVERED/RESOLVED         |N      |N       |N        |N      |N       |N       |N     |2014-01-16 |2014-01-09 |2014-01-11 |      8|     10|Y       |
#> |CDISCPILOT01 |AE     |01-701-1023 |     3|E10    |ATRIOVENTRICULAR BLOCK SECOND DEGREE |AV BLOCK SECOND DEGREE   |      NA|ATRIOVENTRICULAR BLOCK SECOND DEGREE |     NA|HLT_0415 |      NA|HLGT_0086 |       NA|CARDIAC DISORDERS                                    |       NA|CARDIAC DISORDERS                                    |      NA|MILD  |N     |NA    |POSSIBLE |NOT RECOVERED/NOT RESOLVED |N      |N       |N        |N      |N       |N       |N     |2012-08-27 |2012-08-26 |NA         |     22|     NA|Y       |
#> |CDISCPILOT01 |AE     |01-701-1023 |     1|E08    |ERYTHEMA                             |ERYTHEMA                 |      NA|ERYTHEMA                             |     NA|HLT_0284 |      NA|HLGT_0192 |       NA|SKIN AND SUBCUTANEOUS TISSUE DISORDERS               |       NA|SKIN AND SUBCUTANEOUS TISSUE DISORDERS               |      NA|MILD  |N     |NA    |POSSIBLE |NOT RECOVERED/NOT RESOLVED |N      |N       |N        |N      |N       |N       |N     |2012-08-27 |2012-08-07 |2012-08-30 |      3|     26|Y       |